Package index • bibliomatrix

All functions

abm_bullet(): Create bullet graph with reference line

abm_bullet_plotly(): Create alternate bullet graph with reference line (using ggplot conversion to plotly)

abm_bullet_plotly2(): Create alternate bullet graph with reference line (using plotly directly)

abm_config(): Provide defaults for ABM analysis

abm_copub_countries(): Create table over co-publication countries for ABM unit

abm_copub_countries_staffbased(): Create staffbased table over co-publication countries for ABM unit

abm_copub_data(): Retrieve co-publishing organizations for ABM tables

abm_copub_orgs(): Create table over co-publication countries for ABM unit

abm_copub_orgs_staffbased(): Create staffbased table over co-publication organizations for ABM unit

abm_coverage(): Retrieve WoS and Scopus coverage for peer reviewed DiVA publication types

abm_dash_indices(): Retrieve dashboard indicators for ABM

abm_data(): Retrieve data for ABM tables and graphs from master table

abm_data_workbook(): Create Excel workbook with ABM publication data

abm_decode_jwt(): Decode JWT string

abm_divisions(): Divisions used in ABM

abm_division_stats(): Publication summary stats for ABM divisions

abm_graph_cf(): Create graph over Cf by year, WoS

abm_graph_cf_plotly(): Create graph over DiVA publication types by year, using plotly

abm_graph_copub(): Create graph over international and Swedish non-university copublications by year, WoS

abm_graph_copub_plotly(): Create graph over international and Swedish non-university copublications by year, using plotly

abm_graph_diva(): Create graph over DiVA publication types by year

abm_graph_diva2(): Create graph over DiVA publication types by year (ggplot, plotly and ggiraph variants)

abm_graph_diva_plotly(): Create graph over DiVA publication types by year, using plotly

abm_graph_divisions(): ABM divisions as force directed network

abm_graph_jcf(): Create graph over jcf by year, WoS

abm_graph_jcf_plotly(): Create graph over jcf by year, using plotly

abm_graph_oadata_linegraphs(): Chart displaying the development of Open Access data publications over time

abm_graph_oadata_pie(): Create pie chart for Open Access data

abm_graph_oadata_piechart(): Pie chart for Open Access data

abm_graph_oadata_share(): Chart displaying shares of Open Access data publications

abm_graph_oadata_stackedarea(): Create stacked area graph for Open Access data

abm_graph_oadata_stackedarea_plotly(): Plotly chart wrapping the abm_graph_oadata_stacked graph

abm_graph_oa_lines(): Create line graph over share of publications by OA type and year

abm_graph_scop_copub(): Create graph over international and corporate copublications by year, Scopus

abm_graph_scop_normcit(): Create graph over Scopus FWCI by years

abm_graph_scop_snip(): Create graph over SNIP by year, Scopus

abm_graph_scop_top10(): Create graph over Top 10% publications by year, Scopus

abm_graph_scop_top20(): Create graph over Top 20% journals by year, Scopus

abm_graph_sdg(): Create graph over SDGs

abm_graph_sdg_mobile(): Create graph over SDGs, mobile version

abm_graph_top10(): Create graph over Top 10% publications by year, Wos

abm_graph_top10_plotly(): Create graph over Cf by year, using plotly

abm_graph_top20(): Create graph over Top 20% journals by year, WoS

abm_graph_top20_plotly(): Create graph over Top 20% journals by year, using plotly

abm_graph_wos_coverage(): Create graph over WoS coverage by DiVA publication type

abm_graph_wos_coverage_plotly(): Create graph over WoS coverage by year, using plotly

abm_plotlyfy(): Plotlyfy graph in ABM context

abm_private_data(): Private data from the Annual Bibliometric Monitoring project

abm_publications(): Retrieve publication list for ABM

abm_public_data(): Public data from the Annual Bibliometric Monitoring project

abm_public_kth: Public data with Annual Bibliometric Monitoring for KTH assembed in 2019

abm_pubs_summary(): Summary for a list of publications

abm_report(): A report used in ABM

abm_researchers(): Researchers used in ABM

abm_sdg_table(): Create table over SDGs for the selected unit

abm_sdg_year(): Create table over any SDG by year for the selected unit

abm_slugs_departments(): Slugs or identifiers for departments at KTH used in ABM

abm_staff_data(): Get publications from members of unit via kthids

abm_staff_list(): Get staff list from slug

abm_table1(): Retrieve Table 1 (Publications in DiVA) for ABM, fractional counts

abm_table1_full(): Retrieve Table 1 (Publications in DiVA) for ABM, full counts

abm_table2(): Retrieve Table 2 (Citations 3-year window) for ABM

abm_table3(): Retrieve Table 3 (Field normalized citations) for ABM

abm_table4(): Retrieve Table 4 (Journal impact) for ABM

abm_table5(): Retrieve Table 5 (Co-publishing) for ABM

abm_table6(): Retrieve Table 6 (OA data) for ABM

abm_table_scop_cit(): Retrieve citations table (Scopus) for ABM

abm_table_scop_copub(): Retrieve Co-publishing table (Scopus) for ABM

abm_table_scop_normcit(): Retrieve field normalized citations table (Scopus) for ABM

abm_table_scop_snip(): Retrieve Journal impact table (Scopus) for ABM

abm_ui_bullet_citations(): Bullet graph for citations in ABM

abm_ui_bullet_journal(): Bullet graph for journal citations in ABM

abm_ui_button_altmetric(): Link to Altmetric Explorer for an organizational unit at KTH

abm_ui_button_diva(): Link to DiVA portal at KTH

abm_ui_button_publist(): Link to Publication List download for KTH

abm_ui_datatable_cf(): Datatable for 3 year citations (cf)

abm_ui_datatable_cit3y(): Datatable for 3 year citations

abm_ui_datatable_copub(): Datatable for co-publication (WoS)

abm_ui_datatable_copub_countries(): Datatable for co-publication countries (WoS)

abm_ui_datatable_copub_orgs(): Datatable for co-publication organizations (WoS)

abm_ui_datatable_diva(): Datatable for DiVA publications

abm_ui_datatable_diva_full(): Datatable for DiVA publications, full counts

abm_ui_datatable_jcf(): Datatable for journal impact (jcf)

abm_ui_datatable_oa(): Datatable for open access publications

abm_ui_datatable_publications(): Datatable for publication list

abm_ui_datatable_researchers(): Datatable for researchers

abm_ui_datatable_scop_cit(): Datatable for Scopus citations

abm_ui_datatable_scop_copub(): Datatable for co-publication (Scopus)

abm_ui_datatable_scop_normcit(): Datatable for Scopus FWCI

abm_ui_datatable_scop_snip(): Datatable for Scopus journal impact (SNIP)

abm_ui_datatable_sdg_table(): Datatable for SDG publications by goal

abm_ui_datatable_sdg_year(): Datatable for SDG publications by year

abm_ui_kable_cf(): HTML table for 3 year citations (cf)

abm_ui_kable_cit3y(): HTML table for 3 year citations

abm_ui_kable_copub(): HTML table for co-publication (WoS)

abm_ui_kable_copub_countries(): HTML table for co-publication countries (WoS)

abm_ui_kable_copub_orgs(): HTML table for co-publication organizations (WoS)

abm_ui_kable_diva(): HTML table for DiVA publications

abm_ui_kable_diva_full(): HTML table for DiVA publications, full counts

abm_ui_kable_jcf(): HTML table for journal impact (jcf)

abm_ui_kable_oa(): HTML table for open access publications

abm_ui_kable_scop_cit(): HTML table for Scopus citations

abm_ui_kable_scop_copub(): HTML table for co-publication (Scopus)

abm_ui_kable_scop_normcit(): HTML table for Scopus FWCI

abm_ui_kable_scop_snip(): HTML table for Scopus journal impact (SNIP)

abm_ui_kable_sdg_table(): HTML table for SDG publications by goal

abm_ui_kable_sdg_year(): HTML table for SDG publications by year

abm_ui_note(): A note to keep in mind when interpreting results

abm_ui_summary_pubs(): Summary valuebox for publications

abm_ui_valuebox_coverage(): Value box for coverage in ABM

abm_ui_valuebox_publications(): Value box for number of publications in ABM

abm_ui_waffle_copub(): Waffle graph for co-publications in ABM

abm_unit_pubs(): Publications for ABM researchers belonging to a unit

abm_unit_stats(): Publication summary stats for ABM divisions and institutions and schools

abm_waffle_pct(): Create waffle chart (5 rows, 20 columns) for any single percentage

abm_waffle_pct_plotly(): Create alternate waffle chart (with plotly)

bibliomatrix package-bibliomatrix: bibliomatrix

con_bib(): Connection to Bibliometrics data source for KTH

coveragetext(): Generate text for Web of Science coverage warnings

db_sqlite_location(): Location of sqlite3 db file for BIBMON data

db_sync(): Sync the MS SQL Server database BIBMON to a local SQLite3 db

db_upload_crawl(): Crawl and persist organizational data from KTH API

db_upsert_table(): Create or overwrite table at connection source

displayname_from_kthid(): KTH displayname from user account identifier

get_analysis_date(): Get date of indicator extraction for ABM

get_indic_descriptions(): Get displayname and descriptions for indicators

get_pubtype_order(): Get order of publication type for ABM table 1

kthids_from_slug(): Given a organizational unit slug, such as "j/jj/jjn", retrieves associated KTH researcher ids

kthid_from_accountname(): KTH user account identifier (kthid) from account name

kth_catalog_crawl(): Given an organizational "slug", a depth first traversal is made enumerating organizational units (descendants)

kth_divisions_crawl(): Crawl kthapi for divisions

kth_theme(): KTH plot theme for ggplot

mean_indicator_units(): Calculate average citation indicators across years

nowrap_html(): String formatting utility to avoid wrapping of hyphens inside compound words while retaining search in HTML content using Ctrl-F.

nowrap_hyphen_sub(): String formatting utility to substitute soft hyphens inside compound words with non-breaking hard "long" hyphens using HTML character entity encoding

palette_kth(): KTH color palette with 5 qualitative colors

palette_kth_info(): KTH color palette information

prerender(): Prerender dashboards for public data

prerender_cache_location(): Location for prerender cache with dashboard HTML content

prerender_cache_sync(): Update shiny apps www/cache with prerenderd dashboard HTML content

run_api(): Running this function launches a Plumber API presenting resources bundled in this package

run_app(): Running this function launches a Shiny web application presenting the datasets bundled in this package

sliding_intervals(): Create integer intervals useful for e.g. sliding means

status_db(): Status message related to db availability

status_kthapi(): Status message related to KTH API availability

status_renviron(): Status message related to R environment file availability

timegraph_header_legend(): Graph to subheader of timegraph

time_graph(): Graph of indicators by year, with or without moving average and/or reference line

unit_info(): Retrieve information about ABM units (level 0-2) from database or from package data

wos_attribution(): Generate Web of Science attribution

wos_disclaimer(): Generate Web of Science disclaimer